Protein ZmEREB48 | |
---|---|
Information | |
TF Name: | ZmEREB48 |
Species: | Maize |
TF Family: | AP2/ERF-ERF |
Gene Name(Synonym): | EREB48 |
Uniprot ID: | K7W2Q8 |
ZmEREB48 is a protein in the AP2/ERF-ERF family.
Overview of domains present in v5 transcripts | |
---|---|
PF00847 | |
Zm00001eb402030_T001 |
Gene ID | Type | MEME Logo | Sequence | FIMO | Position |
---|---|---|---|---|---|
Zm00001d048296 | DAPseq | sequence | fimo | position | |
Zm00001d048296 | DAPseq | sequence | fimo | position | |
Zm00001d048296 | ChIPseq | sequence | fimo | position | |
Zm00001d048296 | PChIPseq | sequence | fimo | position |
MESYGHKRAWKKEPTRGKGGPQNAACEYRGVRQRTWGKWVAEIREPNKRARLWLGSFATAEEAALAYDEAARRLYGTDVF
LNLPHLRASGVSAAGAGNAHERLRWLPAASARGAAVPAYGLLNLNAQHNVHVIHQRLQELKNNGSPADHLPAAASTSPCS
TVTTRAAAALPAPMSCFHALEQAVTTVATRTTVDDAEPCEGGACPSGADKPQIDLSEFLQQIGVLNNTDDDGIRTTAKAS
FRGDAAEAGCFGGNGEFDWDALAADLNDIAGAGVHGGVNGGFQMDDLHEHEVEQFGTCLPIPVWDVQ
MESYGHKRAWKKEPTRGKGGPQNAACEYRGVRQRTWGKWVAEIREPNKRARLWLGSFATAEEAALAYDEAARRLYGTDVF
LNLPHLRASGVSAAGAGNAHERLRWLPAASARGAAVPAYGLLNLNAQHNVHVIHQRLQELKNNGSPADHLPAAASTSPCS
TVTTRAAAALPAPMSCFHALEQAVTTVATRTTVDDAEPCEGGACPSGADKPQIDLSEFLQQIGVLNNTDDDGIRTTAKAS
FRGDAAEAGCFGGNGEFDWDALAADLNDIAGAGVHGGVNGGFQMDDLHEHEVEQFGTCLPIPVWDVQ
MESYGHKRAWKKEPTRGKGGPQNAACEYRGVRQRTWGKWVAEIREPNKRARLWLGSFATAEEAALAYDEAARRLYGTDVF
LNLPHLRASGVSAAGAGNAHERLRWLPAASARGAAVPAYGLLNLNAQHNVHVIHQRLQELKNNGSPADHLPAAASTSPCS
TVTTRAAAALPAPMSCFHALEQAVTTVATRTTVDDAEPCEGGACPSGADKPQIDLSEFLQQIGVLNNTDDDGIRTTAKAS
FRGDAAEAGCFGGNGEFDWDALAADLNDIAGAGVHGGVNGGFQMDDLHEHEVEQFGTCLPIPVWDVQ
MESYGHKRAWKKEPTRGKGGPQNAACEYRGVRQRTWGKWVAEIREPNKRARLWLGSFATAEEAALAYDEAARRLYGTDVF
LNLPHLRASGVSAAGAGNAHERLRWLPAASARGAAVPAYGLLNLNAQHNVHVIHQRLQELKNNGSPADHLPAAASTSPCS
TVTTRAAAALPAPMSCFHALEQAVTTVATRTTVDDAEPCEGGACPSGADKPQIDLSEFLQQIGVLNNTDDDGIRTTAKAS
FRGDAAEAGCFGGNGEFDWDALAADLNDIAGAGVHGGVNGGFQMDDLHEHEVEQFGTCLPIPVWDVQ
MESYGHKRAWKKEPTRGKGGPQNAACEYRGVRQRTWGKWVAEIREPNKRARLWLGSFATAEEAALAYDEAARRLYGTDVF
LNLPHLRASGVSAAGAGNAHERLRWLPAASARGAAVPAYGLLNLNAQHNVHVIHQRLQELKNNGSPADHLPAAASTSPCS
TVTTRAAAALPAPMSCFHALEQAVTTVATRTTVDDAEPCEGGACPSGADKPQIDLSEFLQQIGVLNNTDDDGIRTTAKAS
FRGDAAEAGCFGGNGEFDWDALAADLNDIAGAGVHGGVNGGFQMDDLHEHEVEQFGTCLPIPVWDVQ
Secondary Structure Color Code | |
---|---|
BEND | region with high backbone curvature without specific hydrogen bonding |
HELX_LH_PP_P | left-handed polyproline helix |
HELX_RH_3T_P | right-handed 3-10 helix |
HELX_RH_AL_P | right-handed alpha helix |
HELX_RH_PI_P | right-handed pi helix |
STRN | beta strand |
TURN_TY1_P | type I turn |
UNDETERMINED | no data available |
Domains Present | |
---|---|
PF00847 |
|
Hover here to show all domains |
TCAAAATAAACCCTCCTCCGACTCC...
TCAAAATAAACCCTCCTCCGACTCCCCACGCAGCCACGCTCGCTGGTCCGATCCCGTCCAATGGAGAGCTACGGCCACAAGCGCGCGTGGAAGAAGGAACCGACGCGGGGGAAGGGCGGCCCGCAGAACGCGGCGTGCGAGTACCGCGGCGTGCGGCAGCGGACGTGGGGCAAGTGGGTGGCCGAGATCCGAGAGCCCAACAAGCGCGCCCGCCTCTGGCTCGGCTCCTTCGCCACCGCCGAGGAGGCCGCGCTCGCCTACGACGAGGCCGCGCGCAGGCTCTACGGGACCGACGTCTTCCTCAACCTGCCGCACCTCCGCGCCTCGGGAGTCTCCGCCGCCGGCGCCGGCAACGCGCACGAGAGGCTTAGGTGGCTCCCAGCTGCCTCCGCCAGAGGCGCCGCCGTCCCGGCCTACGGCCTGCTCAACCTCAACGCGCAGCACAACGTGCACGTCATCCACCAGAGGCTGCAGGAGCTCAAGAACAACGGCTCGCCCGCCGATCATCTCCCTGCAGCGGCCTCCACGTCTCCCTGCTCGACCGTCACCACCCGCGCGGCTGCGGCCTTGCCTGCGCCCATGTCCTGCTTCCACGCCCTGGAGCAGGCGGTGACCACGGTCGCCACGAGGACGACGGTCGACGACGCTGAGCCGTGCGAGGGCGGCGCCTGCCCGTCCGGTGCGGACAAGCCCCAGATCGACCTCAGCGAGTTCTTGCAGCAGATCGGCGTGCTCAACAACACCGACGACGACGGCATCAGGACTACTGCTAAAGCCAGCTTTCGCGGTGATGCCGCGGAGGCTGGCTGCTTCGGCGGCAACGGCGAGTTCGACTGGGACGCGCTGGCAGCGGACCTCAACGACATCGCGGGAGCAGGAGTCCATGGCGGCGTCAACGGAGGGTTTCAGATGGACGATCTGCATGAGCATGAGGTCGAGCAGTTCGGGACCTGCCTGCCCATCCCTGTCTGGGACGTGCAGTAGTGTGGTGTCAAACGAGTCCATGCAATGTTGAAATATCCCGCCCATCTGCATGCTGCACGTGGCACCGCCTTTCCCTAGCGCACAAGCTTTAGCTTCCAAATTCATGTAATCGATTCAGAATCTGGTGGGTTGATGATGAGTTTGGCATGATGATGAATTTGTGAACAATTGGGCCTACTATTCTTAGTTCTTCA
MESYGHKRAWKKEPTRGKGGPQNAACEYRGVRQRTWGKWVAEIREPNKRARLWLGSFATAEEAALAYDEAARRLYGTDVF
LNLPHLRASGVSAAGAGNAHERLRWLPAASARGAAVPAYGLLNLNAQHNVHVIHQRLQELKNNGSPADHLPAAASTSPCS
TVTTRAAAALPAPMSCFHALEQAVTTVATRTTVDDAEPCEGGACPSGADKPQIDLSEFLQQIGVLNNTDDDGIRTTAKAS
FRGDAAEAGCFGGNGEFDWDALAADLNDIAGAGVHGGVNGGFQMDDLHEHEVEQFGTCLPIPVWDVQ
CATTTCGAAGCTAGGTTAGGTAGCT...
CATTTCGAAGCTAGGTTAGGTAGCTCCTGCTTGCATTGGCGTTCAAAATAAACCCTCCTCCGACTCCCCACGCAGCCACGCTCGCTGGTCCGATCCCGTCCAATGGAGAGCTACGGCCACAAGCGCGCGTGGAAGAAGGAACCGACGCGGGGGAAGGGCGGCCCGCAGAACGCGGCGTGCGAGTACCGCGGCGTGCGGCAGCGGACGTGGGGCAAGTGGGTGGCCGAGATCCGAGAGCCCAACAAGCGCGCCCGCCTCTGGCTCGGCTCCTTCGCCACCGCCGAGGAGGCCGCGCTCGCCTACGACGAGGCCGCGCGCAGGCTCTACGGGACCGACGTCTTCCTCAACCTGCCGCACCTCCGCGCCTCGGGAGTCTCCGCCGCCGGCGCCGGCAACGCGCACGAGAGGCTTAGGTGGCTCCCAGCTGCCTCCGCCAGAGGCGCCGCCGTCCCGGCCTACGGCCTGCTCAACCTCAACGCGCAGCACAACGTGCACGTCATCCACCAGAGGCTGCAGGAGCTCAAGAACAACGGCTCGCCCGCCGATCATCTCCCTGCAGCGGCCTCCACGTCTCCCTGCTCGACCGTCACCACCCGCGCGGCTGCGGCCTTGCCTGCGCCCATGTCCTGCTTCCACGCCCTGGAGCAGGCGGTGACCACGGTCGCCACGAGGACGACGGTCGACGACGCTGAGCCGTGCGAGGGCGGCGCCTGCCCGTCCGGTGCGGACAAGCCCCAGATCGACCTCAGCGAGTTCTTGCAGCAGATCGGCGTGCTCAACAACACCGACGACGACGGCATCAGGACTACTGCTAAAGCCAGCTTTCGCGGTGATGCCGCGGAGGCTGGCTGCTTCGGCGGCAACGGCGAGTTCGACTGGGACGCGCTGGCAGCGGACCTCAACGACATCGCGGGAGCAGGAGTCCATGGCGGCGTCAACGGAGGGTTTCAGATGGACGATCTGCATGAGCATGAGGTCGAGCAGTTCGGGACCTGCCTGCCCATCCCTGTCTGGGACGTGCAGTAGTGTGGTGTCAAACGAGTCCATGCAATGTTGAAATATCCCGCCCATCTGCATGCTGCACGTGGCACCGCCTTTCCCTAGCGCACAAGCTTTAGCTTCCAAATTCATGTAATCGATTCAGAATCTGGTGGGTTGATGATGAGTTTGGCATGATGATGAATTTGTGAACAATTGGGCCTACTA
MESYGHKRAWKKEPTRGKGGPQNAACEYRGVRQRTWGKWVAEIREPNKRARLWLGSFATAEEAALAYDEAARRLYGTDVF
LNLPHLRASGVSAAGAGNAHERLRWLPAASARGAAVPAYGLLNLNAQHNVHVIHQRLQELKNNGSPADHLPAAASTSPCS
TVTTRAAAALPAPMSCFHALEQAVTTVATRTTVDDAEPCEGGACPSGADKPQIDLSEFLQQIGVLNNTDDDGIRTTAKAS
FRGDAAEAGCFGGNGEFDWDALAADLNDIAGAGVHGGVNGGFQMDDLHEHEVEQFGTCLPIPVWDVQ
ATGGAGAGCTACGGCCACAAGCGCG...
ATGGAGAGCTACGGCCACAAGCGCGCGTGGAAGAAGGAACCGACGCGGGGGAAGGGCGGCCCGCAGAACGCGGCGTGCGAGTACCGCGGCGTGCGGCAGCGGACGTGGGGCAAGTGGGTGGCCGAGATCCGAGAGCCCAACAAGCGCGCCCGCCTCTGGCTCGGCTCCTTCGCCACCGCCGAGGAGGCCGCGCTCGCCTACGACGAGGCCGCGCGCAGGCTCTACGGGACCGACGTCTTCCTCAACCTGCCGCACCTCCGCGCCTCGGGAGTCTCCGCCGCCGGCGCCGGCAACGCGCACGAGAGGCTTAGGTGGCTCCCAGCTGCCTCCGCCAGAGGCGCCGCCGTCCCGGCCTACGGCCTGCTCAACCTCAACGCGCAGCACAACGTGCACGTCATCCACCAGAGGCTGCAGGAGCTCAAGAACAACGGCTCGCCCGCCGATCATCTCCCTGCAGCGGCCTCCACGTCTCCCTGCTCGACCGTCACCACCCGCGCGGCTGCGGCCTTGCCTGCGCCCATGTCCTGCTTCCACGCCCTGGAGCAGGCGGTGACCACGGTCGCCACGAGGACGACGGTCGACGACGCTGAGCCGTGCGAGGGCGGCGCCTGCCCGTCCGGTGCGGACAAGCCCCAGATCGACCTCAGCGAGTTCTTGCAGCAGATCGGCGTGCTCAACAACACCGACGACGACGGCATCAGGACTACTGCTAAAGCCAGCTTTCGCGGTGATGCCGCGGAGGCTGGCTGCTTCGGCGGCAACGGCGAGTTCGACTGGGACGCGCTGGCAGCGGACCTCAACGACATCGCGGGAGCAGGAGTCCATGGCGGCGTCAACGGAGGGTTTCAGATGGACGATCTGCATGAGCATGAGGTCGAGCAGTTCGGGACCTGCCTGCCCATCCCTGTCTGGGACGTGCAGTAG
MNLEAKACALGKGGATCSMQMGGIFQHCMDSFDTTLLHVPDRDGQAGPELLDLMLMQIVHLKPSVDAAMDSCSRDVVEVR
CQRVPVELAVAAEAASLRGITAKAGFSSSPDAVVVGVVEHADLLQELAEVDLGLVRTGRAGAALARLSVVDRRPRGDRGH
RLLQGVEAGHGRRQGRSRAGGDGRAGRRGGRCREMIGGRAVVLELLQPLVDDVHVVLRVEVEQAVGRDGGASGGGSWEPP
KPLVRVAGAGGGDSRGAEVRQVEEDVGPVEPARGLVVGERGLLGGGEGAEPEAGALVGLSDLGHPLAPRPLPHAAVLARR
VLRAALPPRRFLLPRALVAVALHWTGSDQRAWLRGESEEGLF
TAGGCCCAATTGTTCACAAATTCAT...
TAGGCCCAATTGTTCACAAATTCATCATCATGCCAAACTCATCATCAACCCACCAGATTCTGAATCGATTACATGAATTTGGAAGCTAAAGCTTGTGCGCTAGGGAAAGGCGGTGCCACGTGCAGCATGCAGATGGGCGGGATATTTCAACATTGCATGGACTCGTTTGACACCACACTACTGCACGTCCCAGACAGGGATGGGCAGGCAGGTCCCGAACTGCTCGACCTCATGCTCATGCAGATCGTCCATCTGAAACCCTCCGTTGACGCCGCCATGGACTCCTGCTCCCGCGATGTCGTTGAGGTCCGCTGCCAGCGCGTCCCAGTCGAACTCGCCGTTGCCGCCGAAGCAGCCAGCCTCCGCGGCATCACCGCGAAAGCTGGCTTTAGCAGTAGTCCTGATGCCGTCGTCGTCGGTGTTGTTGAGCACGCCGATCTGCTGCAAGAACTCGCTGAGGTCGATCTGGGGCTTGTCCGCACCGGACGGGCAGGCGCCGCCCTCGCACGGCTCAGCGTCGTCGACCGTCGTCCTCGTGGCGACCGTGGTCACCGCCTGCTCCAGGGCGTGGAAGCAGGACATGGGCGCAGGCAAGGCCGCAGCCGCGCGGGTGGTGACGGTCGAGCAGGGAGACGTGGAGGCCGCTGCAGGGAGATGATCGGCGGGCGAGCCGTTGTTCTTGAGCTCCTGCAGCCTCTGGTGGATGACGTGCACGTTGTGCTGCGCGTTGAGGTTGAGCAGGCCGTAGGCCGGGACGGCGGCGCCTCTGGCGGAGGCAGCTGGGAGCCACCTAAGCCTCTCGTGCGCGTTGCCGGCGCCGGCGGCGGAGACTCCCGAGGCGCGGAGGTGCGGCAGGTTGAGGAAGACGTCGGTCCCGTAGAGCCTGCGCGCGGCCTCGTCGTAGGCGAGCGCGGCCTCCTCGGCGGTGGCGAAGGAGCCGAGCCAGAGGCGGGCGCGCTTGTTGGGCTCTCGGATCTCGGCCACCCACTTGCCCCACGTCCGCTGCCGCACGCCGCGGTACTCGCACGCCGCGTTCTGCGGGCCGCCCTTCCCCCGCGTCGGTTCCTTCTTCCACGCGCGCTTGTGGCCGTAGCTCTCCATTGGACGGGATCGGACCAGCGAGCGTGGCTGCGTGGGGAGTCGGAGGAGGGTTTATTTTGAACGCCAATGCAAGCAGGAGCTACCTAACCTAGCTTCG
Copyright © 2023 Grassius.org | Last updated: 2023-06-26